Introduction

Explains data analysis with python for beginners. This article is the second one.

Previous article: Data analysis starting with python (data visualization 1) https://qiita.com/CEML/items/d673713e25242e6b4cdb

Source code https://gitlab.com/ceml/qiita/-/blob/master/src/python/notebook/first_time_data_analysis.ipynb

Last review

In this series We will explain from reading data to simple data analysis using a dataset that is open to the public for free.

About the dataset

・ Provided by: California Institute of Technology ・ Contents: Test data of heart disease patients ・ URL: https://archive.ics.uci.edu/ml/datasets/Heart+Disease -Use only processed.cleveland.data in the above URL.

Analysis purpose

The dataset classifies the patient's condition into five classes. I will proceed with the analysis for the purpose of grasping the characteristics of each class.

* Please refer to past articles for downloading and reading data. </ font>

Contents of this article

Improves the histogram that was hard to see last time.

Remedy

The plot of the previous problem was shown below.

import pandas as pd

columns_name = ["age", "sex", "cp", "trestbps", "chol", "fbs", "restecg", "thalach", "exang", "oldpeak","slope","ca","thal","class"]
data = pd.read_csv("/Users/processed.cleveland.data", names=columns_name)

class_group = data.groupby("class")
class_group["age"].hist(alpha=0.7)
plt.legend([0,1,2,3,4])

There are two possible reasons why it is difficult to see. ①. The figures overlap. ②. The range of bin is different for each class.

This time, we will improve these problems using plotly. Of course, matplotlib can solve the problem, but plotly is also convenient, so there is no loss in using it. The nice thing about plotly is that you can create interactive plots. * Since the figure was not embedded well this time, please click the image and experience the interactive operation at the link destination. </ font>

① Improvement measures

import plotly.graph_objects as go

fig = go.Figure()
for i in range(len(class_group)):
    fig.add_trace(go.Histogram(x=class_group["age"].get_group(i), nbinsx=10))
    
# fig.update_layout(barmode='overlay')
fig.update_traces(opacity=0.8)
fig.show()

* Please click the figure and experience the interactive operation.

② Improvement measures

Just by turning on the comment out part earlier, the figure will be drawn.

import plotly.graph_objects as go
fig = go.Figure()
for i in range(len(class_group)):
    fig.add_trace(go.Histogram(x=class_group["age"].get_group(i), nbinsx=10))  
 
fig.update_layout(barmode='overlay')
fig.update_traces(opacity=0.8)
fig.show()